PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do019699.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bHLH
Protein Properties Length: 269aa    MW: 29074.3 Da    PI: 4.4471
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do019699.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.80.000452112343255
                 ..TTS-STCHHHHHHHHHHHHHHH CS
         HLH  32 kapskKlsKaeiLekAveYIksLq 55 
                 + +++K++ +++Le+Av+Y+k Lq
  Do019699.1 211 SSGGGKVDISTMLEEAVQYVKFLQ 234
                 56899******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MESSEASWHS FDPSVAVEDS EAMAQLLAVQ YFGNEQKQPA AAAMYWPACQ EADQYYGSAP  60
FYMQQPNPGA NCYDHAGYYG GGVVTMTGDF FVPDEQLGDP SFMLDLNLDF EDQDGGGNVP  120
AACKRKLEDR KDKSTTCTVP KKKSCSAAMP AQKKGKNAQS KKAQKGACSR GNQEKSDGDG  180
NMQCSGNYLS DDDSLEMTAC SNVSSASRKS SSGGGKVDIS TMLEEAVQYV KFLQVQIKLL  240
SSDDMWMFAP IAYNGVNVGL DLKISPPQQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014661366.11e-126PREDICTED: transcription factor bHLH139
TrEMBLK4AK541e-156K4AK54_SETIT; Uncharacterized protein
STRINGSi039277m1e-156(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP116802832
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.16e-25bHLH family protein